CSc 645 Geometric Matching and Applications to Biology
Fall 2004, MoWe 1:30-2:45, GLS 701
Instructor
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Alon Efrat
Office: Gould-Simpson 742; phone: 626-8047
Office Hours: TuTh 5:00-6:00 PM, or by appointment
Email: alon@cs.arizona.edu |
In the seminar we discuss different methods for comparing and matching objects in different geometric settings,
with an emphasis on applications to Biology.
In particular, we discuss
Matching sets of points
Methods for surface matching.
The Michelangelo project.
Geometric Hashing
Geometric methods of protein docking
Approximated Matching and Fast Fourier Transform
Geometric methods of Protein Docking
Curves matching.
Hausdorff distance and Frechet Distance.
Algorithms for Electrophoresis Gel Analysis.
Algorithms for Drug Design.
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The final grade is based on the quality of presentations of papers in the classroom.
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A full list of the papers can be found in the syllabus
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Dates
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URL: http://http://www.cs.arizona.edu/classes/cs645/fall04/index.html