Students
It's been a pleasure to do research with the following students.
Current
Katie Cunningham
(BS, asthma epigenetics)
Dan DeBlasio
(PhD, multiple sequence alignment)
Ben Salazar
(BS, protein secondary structure prediction)
August Woerner
(MS, nearest neighbor search)
Former
Postdoctoral
Thomas Christof (1998,
physical mapping of chromosomes
)
PhD
Eagu Kim
(2008,
inverse parametric alignment
; postdoc at U Wisconsin-Madison with Colin Dewey)
Dean Starrett
(2008,
multiple sequence alignment
; postdoc at UC Berkley with Kimmen Sjölander)
Travis Wheeler
(2009,
multiple alignment and phylogeny
; postdoc at HHMI Janelia Farm Research Campus with Sean Eddy)
MS
Yuhua Liu (1997,
suffix-tree data structure
)
Jonathan Myers (2001,
DNA sequence assembly
)
Justin Pecqueur (1998,
maximum matchings in general graphs
)
David Perkins
(2009,
protein secondary structure prediction
)
Jun Yu (2000,
DNA sequence assembly
)
BS
Joseph Thomas
(2010,
nearest neighbor search
)